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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19759.1Formamidase; PFAM: Acetamidase/Formamidase; KEGG: dac:Daci_0179 formamidase. (410 aa)    
Predicted Functional Partners:
ACS19758.1
TIGRFAM: regulatory protein, FmdB family; KEGG: dac:Daci_0180 FmdB family regulatory protein.
 
   
 0.954
ACS17224.1
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pna:Pnap_2104 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
    
 0.913
ACS17311.1
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: vei:Veis_4206 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
    
 0.913
ACS19167.1
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mpt:Mpe_A0993 aliphatic nitrilase.
    
 0.913
ACS18283.1
TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: mpt:Mpe_A2076 L-glutamine synthetase.
    
 0.911
ACS21413.1
PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: lch:Lcho_1626 Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
 0.906
ACS19468.1
TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: pol:Bpro_3278 assimilatory nitrite reductase (NAD(P)H) small subunit.
     
  0.900
ACS19469.1
TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: pol:Bpro_3276 assimilatory nitrite reductase (NAD(P)H) large subunit precursor.
     
  0.900
ACS19636.1
PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: bbr:BB1323 formate dehydrogenase subunit gamma.
     
  0.900
ACS19637.1
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: mpt:Mpe_A3709 NADH dehydrogenase (quinone).
     
  0.900
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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