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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19766.1Two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: pol:Bpro_0562 two component transcriptional regulator, LuxR family. (302 aa)    
Predicted Functional Partners:
ACS19765.1
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: mpt:Mpe_A3586 sensor histidine kinase/response regulator.
 
 
 0.966
ACS20852.1
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: aav:Aave_3525 integral membrane sensor hybrid histidine kinase.
 
 
 0.858
ACS19764.1
TIGRFAM: urea ABC transporter, urea binding protein; KEGG: mpt:Mpe_A3587 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein.
 
     0.813
ACS19758.1
TIGRFAM: regulatory protein, FmdB family; KEGG: dac:Daci_0180 FmdB family regulatory protein.
 
     0.778
ACS19762.1
TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: dac:Daci_0222 UreA ABC transporter, permease protein UrtC; Belongs to the binding-protein-dependent transport system permease family.
 
     0.757
ACS19763.1
TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: mpt:Mpe_A3588 branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.738
ACS19759.1
Formamidase; PFAM: Acetamidase/Formamidase; KEGG: dac:Daci_0179 formamidase.
 
     0.723
ACS19761.1
TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: mpt:Mpe_A3590 branched-chain amino acid ABC transporter, ATP-binding protein.
 
     0.714
ACS19760.1
KEGG: dac:Daci_0224 UreA ABC transporter, ATP-binding protein UrtE; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase.
 
     0.672
ACS22172.1
KEGG: acr:Acry_0578 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein; response regulator receiver; histidine kinase A domain protein; PAS domain containing protein.
 
 
 0.672
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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