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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19779.1KEGG: pae:PA3501 hypothetical protein. (73 aa)    
Predicted Functional Partners:
ACS19778.1
PFAM: Rieske [2Fe-2S] domain protein; KEGG: pol:Bpro_3681 Rieske (2Fe-2S) region.
  
    0.805
ACS19777.1
PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: pol:Bpro_3680 ferredoxin.
       0.751
ACS19782.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pol:Bpro_3684 glyoxalase/bleomycin resistance protein/dioxygenase.
  
    0.721
ACS19780.1
PFAM: monooxygenase FAD-binding; KEGG: dac:Daci_2905 monooxygenase FAD-binding.
       0.685
ACS19789.1
PFAM: Cupin 2 conserved barrel domain protein; KEGG: rpi:Rpic_4508 cupin 2 conserved barrel domain protein.
  
    0.655
nadX
Aspartate dehydrogenase; Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate.
       0.614
ACS19781.1
PFAM: conserved hypothetical protein; KEGG: dac:Daci_1798 hypothetical protein.
       0.612
ACS19776.1
Porin; KEGG: vei:Veis_1304 porin.
       0.603
ACS19783.1
PFAM: Aldehyde Dehydrogenase; KEGG: pol:Bpro_3685 betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.581
ACS19785.1
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: dac:Daci_0959 hypothetical protein; Belongs to the TPP enzyme family.
       0.570
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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