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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19831.1PFAM: protein of unknown function DUF521; KEGG: bcm:Bcenmc03_6224 hypothetical protein. (431 aa)    
Predicted Functional Partners:
ACS19830.1
PFAM: protein of unknown function DUF126; KEGG: bch:Bcen2424_6625 hypothetical protein.
 
 
 0.979
ACS19832.1
PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: bch:Bcen2424_1199 IclR family transcriptional regulator.
       0.644
ACS19833.1
PFAM: FAD dependent oxidoreductase; KEGG: vei:Veis_3505 FAD dependent oxidoreductase.
       0.497
ACS19829.1
PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: bch:Bcen2424_6629 dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
       0.457
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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