close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19840.1Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; PAS fold-4 domain protein; SMART: regulatory protein LuxR; KEGG: pol:Bpro_1379 transcriptional regulator, LuxR family. (385 aa)    
Predicted Functional Partners:
ACS20166.1
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: sus:Acid_5780 serine/threonine protein kinase.
  
 
 0.696
ACS22397.1
Acyl-homoserine-lactone synthase; KEGG: afr:AFE_1999 autoinducer synthesis protein.
 
  
 0.655
ACS21226.1
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: reu:Reut_B5477 regulatory protein, LuxR.
  
     0.594
ACS19841.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_2721 ABC transporter related.
     
 0.515
ACS19839.1
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: rme:Rmet_1892 transcriptional regulator, LuxR family.
       0.514
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.