Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACS19841.1PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_2721 ABC transporter related. (620 aa)    
Predicted Functional Partners:
ACS22347.1
PFAM: manganese and iron superoxide dismutase; SMART: Rhodanese domain protein; KEGG: pol:Bpro_2502 manganese and iron superoxide dismutase.
  
 
 0.736
ACS20203.1
PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: mms:mma_1846 iron utilization protein.
  
 
 0.630
ACS21068.1
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: dac:Daci_2079 ABC transporter related.
   
 
 0.627
ACS21206.1
KEGG: ppw:PputW619_4382 type I secretion system ATPase; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
   
 
 0.627
ACS20361.1
PFAM: KR domain protein; Beta-ketoacyl synthase; Acyl transferase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: aav:Aave_3732 beta-ketoacyl synthase.
 
 
 0.616
ACS17427.1
PFAM: glycosyl transferase family 2; Methyltransferase type 11; glycosyl transferase group 1; KEGG: gbe:GbCGDNIH1_0743 glycosyltransferase.
  
 
 0.572
ACS16813.1
PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pna:Pnap_0112 ATPase central domain-containing protein.
   
 0.546
ACS17476.1
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: pna:Pnap_3460 ABC transporter related.
    
 0.542
ACS19649.1
CbbX protein; KEGG: mpt:Mpe_A2784 AAA type ATPase; TIGRFAM: CbbX protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase.
   
 0.541
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
 
 
 0.531
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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