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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19856.1KEGG: rso:RS03060 hypothetical protein. (215 aa)    
Predicted Functional Partners:
ACS19858.1
PFAM: protein of unknown function DUF802; KEGG: bxe:Bxe_B0803 putative transmembrane protein.
 
     0.955
ACS19859.1
KEGG: bxe:Bxe_B0802 hypothetical protein.
 
     0.955
ACS19857.1
PFAM: OmpA/MotB domain protein; KEGG: azo:azo0281 hypothetical protein.
 
     0.952
ACS17605.1
KEGG: cti:RALTA_A2653 putative histone H1/H5 family protein, HCT subfamily.
  
     0.732
ACS19824.1
KEGG: rfr:Rfer_1225 hypothetical protein.
  
     0.513
ACS19860.1
KEGG: bxe:Bxe_B1808 hypothetical protein.
       0.493
ACS19861.1
KEGG: rso:RS01914 hypothetical protein.
       0.493
ACS19862.1
PFAM: NUDIX hydrolase; KEGG: rlt:Rleg2_0614 NUDIX hydrolase; Belongs to the Nudix hydrolase family.
       0.493
ACS16799.1
KEGG: rfr:Rfer_4043 hypothetical protein.
  
     0.490
ACS21145.1
KEGG: mpt:Mpe_B0617 hypothetical protein.
  
     0.488
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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