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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19868.1Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bac:BamMC406_0449 LysR family transcriptional regulator. (314 aa)    
Predicted Functional Partners:
ACS22252.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: nwi:Nwi_0615 LysR family transcriptional regulator.
  
     0.543
ACS19869.1
PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_0424 major facilitator transporter.
       0.530
ACS22466.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpt:Bpet3900 LysR family transcriptional regulator.
  
     0.526
ACS22050.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: azc:AZC_1928 transcriptional regulator.
  
     0.525
ACS18384.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbr:BB1277 LysR family transcriptional regulator.
  
     0.524
ACS22714.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpt:Bpet3900 LysR family transcriptional regulator.
  
     0.522
ACS21487.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_2354 LysR family transcriptional regulator.
  
     0.519
ACS20849.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bcj:BCAM0464 LysR family regulatory protein; Belongs to the LysR transcriptional regulatory family.
  
     0.497
ACS20887.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dac:Daci_3769 LysR family transcriptional regulator.
  
     0.492
ACS20586.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: vei:Veis_4138 LysR family transcriptional regulator.
  
     0.477
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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