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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19886.1PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bur:Bcep18194_A4852 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family. (391 aa)    
Predicted Functional Partners:
ACS19885.1
PFAM: pyruvate carboxyltransferase; KEGG: dac:Daci_2875 pyruvate carboxyltransferase.
 
 
  0.854
ACS19884.1
KEGG: cti:RALTA_B2224 putative metallothiol transferase.
  
    0.811
ACS19883.1
PFAM: conserved hypothetical protein; KEGG: reh:H16_B0613 probable extra-cytoplasmic solute receptor.
  
    0.645
ACS19887.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cti:RALTA_B2225 putative transcription regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.542
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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