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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19894.1PFAM: Ethanolamine ammonia lyase large subunit; KEGG: rpd:RPD_2981 ethanolamine ammonia lyase large subunit. (464 aa)    
Predicted Functional Partners:
ACS19895.1
PFAM: Ethanolamine ammonia-lyase light chain; KEGG: rpd:RPD_2982 ethanolamine ammonia-lyase small subunit; Belongs to the EutC family.
 
 0.999
ACS19893.1
TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: rpd:RPD_2980 ethanolamine permease.
 
  
 0.919
ACS16995.1
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: pol:Bpro_3128 glycerophosphoryl diester phosphodiesterase.
     
  0.900
ACS20290.1
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: rfr:Rfer_1116 glycerophosphoryl diester phosphodiesterase.
     
  0.900
ACS20612.1
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: rec:RHECIAT_CH0002889 glycerophosphoryl diester phosphodiesterase protein.
     
  0.900
ACS20751.1
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: dia:Dtpsy_0787 glycerophosphodiester phosphodiesterase.
     
  0.900
ACS19897.1
PFAM: HipA domain protein; KEGG: nwi:Nwi_2079 hypothetical protein.
       0.583
ACS19896.1
Transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein; KEGG: reu:Reut_C6143 hypothetical protein.
       0.572
ACS19898.1
KEGG: aci:ACIAD1456 hypothetical protein.
 
     0.540
ACS19892.1
PFAM: peptidylprolyl isomerase FKBP-type; KEGG: dia:Dtpsy_1738 peptidylprolyl isomerase.
       0.519
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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