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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19909.1PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: dac:Daci_4975 major facilitator transporter. (430 aa)    
Predicted Functional Partners:
ACS19910.1
PFAM: protein of unknown function DUF1445; KEGG: pol:Bpro_1776 hypothetical protein; Belongs to the D-glutamate cyclase family.
 
     0.731
ACS19908.1
5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase; Hydantoinaseoxoprolinase domain protein; Hydantoinase/oxoprolinase; KEGG: mpt:Mpe_A2968 5-oxoprolinase (ATP-hydrolyzing).
       0.695
ACS20893.1
PFAM: major facilitator superfamily MFS_1; KEGG: rpi:Rpic_4020 major facilitator superfamily MFS_1.
  
     0.666
ACS19911.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pol:Bpro_1775 transcriptional regulator, LysR family.
 
    0.550
ACS21749.1
PFAM: major facilitator superfamily MFS_1; KEGG: dac:Daci_2813 major facilitator transporter.
  
     0.508
ACS22056.1
PFAM: major facilitator superfamily MFS_1; KEGG: mrd:Mrad2831_5847 major facilitator transporter.
  
     0.471
ACS16965.1
PFAM: extracellular solute-binding protein family 1; KEGG: rfr:Rfer_0883 extracellular solute-binding protein.
 
  
 0.461
ACS17916.1
PFAM: extracellular solute-binding protein family 1; KEGG: aav:Aave_3454 putative periplasmic solute-binding protein.
 
  
 0.454
ACS19775.1
PFAM: major facilitator superfamily MFS_1; KEGG: dac:Daci_0967 major facilitator transporter.
 
  
 0.403
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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