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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19910.1PFAM: protein of unknown function DUF1445; KEGG: pol:Bpro_1776 hypothetical protein; Belongs to the D-glutamate cyclase family. (271 aa)    
Predicted Functional Partners:
ACS20978.1
PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; KEGG: rso:RSc2171 hypothetical protein.
 
    0.911
ACS22924.1
PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; KEGG: rso:RS05394 hypothetical protein.
 
    0.902
ACS20977.1
KEGG: bte:BTH_I0229 UreA amidolyase-related protein; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2.
 
    0.838
ACS22925.1
KEGG: rso:RS05395 hypothetical protein; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2.
 
    0.838
pxpA-2
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
    0.810
pxpA
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
    0.804
ACS19909.1
PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: dac:Daci_4975 major facilitator transporter.
 
     0.731
ACS19908.1
5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase; Hydantoinaseoxoprolinase domain protein; Hydantoinase/oxoprolinase; KEGG: mpt:Mpe_A2968 5-oxoprolinase (ATP-hydrolyzing).
       0.634
ACS19911.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pol:Bpro_1775 transcriptional regulator, LysR family.
 
     0.632
pcp
Pyrrolidone-carboxylate peptidase; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family.
  
    0.576
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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