close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19914.1PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: pol:Bpro_1870 tripartite ATP-independent periplasmic transporter, DctQ component. (164 aa)    
Predicted Functional Partners:
ACS19913.1
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: ajs:Ajs_1941 TRAP dicarboxylate transporter, DctP subunit.
 
  
 0.951
ACS19915.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; Citrate transporter; KEGG: dia:Dtpsy_1742 TRAP dicarboxylate transporter, DctM subunit.
 
 
 0.950
ACS17439.1
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: vei:Veis_1540 TRAP dicarboxylate transporter, DctP subunit.
 
  
 0.736
ACS17437.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: vei:Veis_1538 TRAP dicarboxylate transporter, DctM subunit.
 
 
 0.718
ACS17487.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pna:Pnap_3453 TRAP dicarboxylate transporter, DctM subunit.
 
 
 0.676
ACS17486.1
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pna:Pnap_3454 TRAP dicarboxylate transporter, DctP subunit.
 
  
 0.639
ACS18258.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: dia:Dtpsy_1375 TRAP dicarboxylate transporter, DctM subunit.
 
 
 0.621
ACS21934.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: atc:AGR_C_4974 hypothetical protein.
 
 
 0.619
ACS18372.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: aav:Aave_2594 TRAP dicarboxylate transporter, DctM subunit.
 
 
 0.610
ACS19945.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; C4-dicarboxylate anaerobic carrier; KEGG: lch:Lcho_0415 TRAP dicarboxylate transporter, DctM subunit.
 
 
 0.605
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.