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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19921.1KEGG: dac:Daci_2496 hypothetical protein. (315 aa)    
Predicted Functional Partners:
ACS17859.1
TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: aav:Aave_3702 single-stranded-DNA-specific exonuclease RecJ.
    
 
 0.823
ACS21781.1
Tfp pilus assembly protein tip-associated adhesin PilY1-like protein; KEGG: neu:NE1747 putative type 4 fimbrial biogenesis protein PilY1.
  
     0.577
ACS19922.1
PFAM: phospholipase/Carboxylesterase; KEGG: aav:Aave_2306 phospholipase/carboxylesterase.
       0.554
ACS19920.1
Hypothetical protein.
       0.541
ACS19923.1
PFAM: 2-nitropropane dioxygenase NPD; KEGG: mpt:Mpe_A3247 dioxygenase.
       0.510
ACS16814.1
PFAM: peptidase S41; SMART: PDZ/DHR/GLGF domain protein; KEGG: afw:Anae109_2977 peptidase S41.
  
     0.464
ACS21784.1
Hypothetical protein; KEGG: reu:Reut_A0785 putative Tfp pilus assembly protein PilW.
  
     0.434
ACS21786.1
Hypothetical protein; KEGG: noc:Noc_2270 putative type-4 fimbrial pilin related signal peptide protein.
  
     0.421
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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