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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19924.1KEGG: swi:Swit_2748 hypothetical protein. (227 aa)    
Predicted Functional Partners:
ACS19925.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: lch:Lcho_4269 LysR family transcriptional regulator.
       0.620
ACS18290.1
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bsu:BSU40010 hypothetical protein.
  
     0.596
ACS19923.1
PFAM: 2-nitropropane dioxygenase NPD; KEGG: mpt:Mpe_A3247 dioxygenase.
     
 0.590
ACS19922.1
PFAM: phospholipase/Carboxylesterase; KEGG: aav:Aave_2306 phospholipase/carboxylesterase.
       0.577
ACS22794.1
PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: pmr:PMI0561 hypothetical protein.
  
    0.498
ACS18551.1
PFAM: NADPH-dependent FMN reductase; KEGG: aav:Aave_0879 NADPH-dependent FMN reductase.
 
 
 0.480
ACS20358.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; phosphopantetheine-binding; condensation domain protein; KEGG: aav:Aave_3729 amino acid adenylation domain-containing protein.
   
 
 0.446
ACS19926.1
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: lch:Lcho_4270 short-chain dehydrogenase/reductase SDR.
     
 0.444
ACS21602.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mll5401 hypothetical protein.
  
  
 0.444
ACS19600.1
PFAM: NADPH-dependent FMN reductase; KEGG: pna:Pnap_2421 NADPH-dependent FMN reductase.
 
 
 0.429
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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