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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19932.1PFAM: DTW domain containing protein; KEGG: dia:Dtpsy_3320 DTW domain containing protein. (248 aa)    
Predicted Functional Partners:
ACS19933.1
PFAM: protein of unknown function DUF1501; KEGG: dac:Daci_6011 hypothetical protein.
       0.616
ACS19934.1
PFAM: Protein of unknown function DUF1800; KEGG: dac:Daci_6010 hypothetical protein.
       0.568
ACS18426.1
PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_3076 major facilitator superfamily MFS_1.
  
     0.566
ACS19935.1
KEGG: cvi:CV_1685 hypothetical protein.
       0.555
ACS17001.1
TIGRFAM: polyhydroxyalkanoic acid system protein; KEGG: pna:Pnap_3503 putative polyhydroxyalkanoic acid system protein.
  
     0.532
ACS19715.1
KEGG: vei:Veis_3631 hypothetical protein.
  
     0.517
ACS22383.1
TIGRFAM: integral membrane protein, YccS/YhfK family; hypothetical protein; PFAM: protein of unknown function DUF893 YccS/YhfK; KEGG: pmy:Pmen_0470 YccS/YhfK family integral membrane protein.
  
     0.472
ACS17045.1
PFAM: protein of unknown function DUF28; KEGG: pna:Pnap_3561 hypothetical protein.
  
     0.455
ACS20155.1
KEGG: ypg:YpAngola_A3877 hypothetical protein.
      0.454
ACS17515.1
PFAM: ProQ activator of osmoprotectant transporter ProP; KEGG: pol:Bpro_1033 hypothetical protein.
 
     0.452
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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