close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19935.1KEGG: cvi:CV_1685 hypothetical protein. (156 aa)    
Predicted Functional Partners:
ACS19934.1
PFAM: Protein of unknown function DUF1800; KEGG: dac:Daci_6010 hypothetical protein.
       0.773
ACS19933.1
PFAM: protein of unknown function DUF1501; KEGG: dac:Daci_6011 hypothetical protein.
       0.705
ACS19932.1
PFAM: DTW domain containing protein; KEGG: dia:Dtpsy_3320 DTW domain containing protein.
       0.555
ACS19936.1
PFAM: DSBA oxidoreductase; KEGG: rfr:Rfer_0115 DsbA oxidoreductase.
       0.501
ACS19937.1
PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: mno:Mnod_0121 major facilitator superfamily MFS_1.
       0.431
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.