close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19962.1PFAM: inner-membrane translocator; KEGG: vei:Veis_2712 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (363 aa)    
Predicted Functional Partners:
ACS19961.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_2713 ABC transporter related.
 
  
 0.988
rbsA-3
ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.971
rbsA-2
ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.969
rbsA
ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.968
ACS21242.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_2132 ABC transporter related.
 
 0.966
ACS21470.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A3675 ABC sugar transporter, ATPase subunit.
 
 0.961
ACS19963.1
KEGG: vei:Veis_2711 putative sugar ABC transporter, substrate-binding protein.
 
 
 0.929
ACS17007.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bpy:Bphyt_3236 periplasmic binding protein/LacI transcriptional regulator.
 
 0.867
ACS21922.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bcj:BCAM2280 putative solute-binding component of ABC transporter.
 
 0.860
rbsD
RbsD or FucU transport; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.852
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.