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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19967.1PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_3719 sugar ABC transporter, permease protein, putative. (291 aa)    
Predicted Functional Partners:
ACS19968.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_3718 sugar ABC transporter, permease protein, putative.
 
 0.976
ACS19965.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SM_b20972 putative sugar uptake ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.944
ACS19966.1
PFAM: extracellular solute-binding protein family 1; KEGG: rde:RD1_3720 sugar ABC transporter, periplasmic binding protein, putative.
 
 
 0.940
ACS19961.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_2713 ABC transporter related.
    
 0.930
ACS19970.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_2605 ABC transporter related.
   
 
 0.903
ACS19972.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: pna:Pnap_2602 periplasmic binding protein/LacI transcriptional regulator.
     
 0.902
ACS20300.1
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: vei:Veis_1240 ABC transporter related.
 
 
 0.894
ACS20750.1
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: aav:Aave_3653 ABC transporter-related protein; Belongs to the ABC transporter superfamily.
 
 
 0.894
ACS22291.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csa:Csal_2612 binding-protein-dependent transport systems inner membrane component.
 
 0.894
ACS22830.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_3817 binding-protein-dependent transport systems inner membrane component.
 
 0.894
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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