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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19980.1PFAM: Cupin 2 conserved barrel domain protein; KEGG: pol:Bpro_1841 cupin 2, conserved barrel. (140 aa)    
Predicted Functional Partners:
ACS20354.1
KEGG: aav:Aave_3726 hypothetical protein.
  
    0.604
nadD
Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
   
    0.587
ACS19979.1
Hypothetical protein.
       0.489
ACS20032.1
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pna:Pnap_1487 xylose isomerase domain-containing protein.
 
    0.489
ACS20588.1
SMART: Rhodanese domain protein; KEGG: vei:Veis_4136 rhodanese domain-containing protein.
 
    0.473
ACS21692.1
KEGG: pna:Pnap_1828 hypothetical protein.
 
    0.465
ACS18532.1
PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: cti:RALTA_B1912 conserved hypothetical protein; 4 rhodanese-like domains; contains extra N_term COG5553 domain (modular protein).
 
    0.463
ACS22871.1
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: bxe:Bxe_A2728 LuxR family transcriptional regulator.
  
    0.459
ACS19981.1
KEGG: dac:Daci_2400 ArsR family transcriptional regulator; Belongs to the GbsR family.
       0.456
ACS20490.1
PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: reu:Reut_B5044 rhodanese-like protein.
 
    0.449
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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