Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACS19992.1PFAM: MscS Mechanosensitive ion channel; KEGG: aav:Aave_2167 MscS mechanosensitive ion channel. (426 aa)    
Predicted Functional Partners:
ACS19993.1
PFAM: histone deacetylase superfamily; KEGG: ajs:Ajs_2813 histone deacetylase superfamily protein.
       0.673
ACS21537.1
PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: pol:Bpro_0238 multiple antibiotic resistance (MarC)-related proteins.
 
    0.606
ACS19994.1
PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pna:Pnap_1219 ATPase.
 
     0.569
ACS19991.1
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: dac:Daci_2390 electron transfer flavoprotein alpha/beta-subunit.
       0.521
ACS19995.1
PFAM: protein of unknown function DUF58; KEGG: aav:Aave_2162 hypothetical protein.
       0.515
ACS19990.1
PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: vei:Veis_4692 electron transfer flavoprotein, alpha subunit.
       0.506
ACS19996.1
PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: pol:Bpro_3148 transglutaminase-like.
       0.456
ACS20736.1
PFAM: protein of unknown function DUF502; KEGG: dac:Daci_5454 hypothetical protein.
 
     0.437
ACS21754.1
PFAM: MltA domain protein; 3D domain protein; KEGG: dia:Dtpsy_3363 MltA domain protein.
  
     0.437
ACS18261.1
KEGG: pol:Bpro_1783 hypothetical protein.
  
     0.430
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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