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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19993.1PFAM: histone deacetylase superfamily; KEGG: ajs:Ajs_2813 histone deacetylase superfamily protein. (317 aa)    
Predicted Functional Partners:
ACS20548.1
PFAM: nuclear protein SET; SMART: nuclear protein SET; SET-related domain protein; KEGG: bxe:Bxe_C1219 hypothetical protein.
 
 0.757
ACS21803.1
Histone-lysine N-methyltransferase; KEGG: dac:Daci_0883 nuclear protein SET; PFAM: nuclear protein SET; SMART: nuclear protein SET.
  
 0.724
ACS19992.1
PFAM: MscS Mechanosensitive ion channel; KEGG: aav:Aave_2167 MscS mechanosensitive ion channel.
       0.690
htpG
Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.
    
 0.675
ACS21191.1
PFAM: SNF2-related protein; restriction endonuclease; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: bpt:Bpet0222 helicase, putative.
    
 0.646
ACS21202.1
PFAM: helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: aav:Aave_0157 helicase domain-containing protein.
    
 0.646
ACS22387.1
Hypothetical protein; KEGG: swi:Swit_0196 helicase domain-containing protein.
    
 0.646
ACS21860.1
KEGG: xac:XAC3352 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 
  
 0.638
ACS16957.1
PFAM: Silent information regulator protein Sir2; KEGG: aeh:Mlg_2040 silent information regulator protein Sir2.
    
 
 0.634
ACS19994.1
PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pna:Pnap_1219 ATPase.
       0.603
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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