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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20013.1PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ajs:Ajs_0384 ABC transporter related; Belongs to the ABC transporter superfamily. (357 aa)    
Predicted Functional Partners:
ACS20011.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_1027 binding-protein-dependent transport systems inner membrane component.
 
 0.995
ACS20010.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dia:Dtpsy_0379 binding-protein-dependent transport systems inner membrane component.
 0.990
ACS20008.1
KEGG: dac:Daci_1030 extracellular solute-binding protein.
 
 0.985
ACS20012.1
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pol:Bpro_0479 ABC transporter related; Belongs to the ABC transporter superfamily.
 
  
 
0.972
ACS20009.1
KEGG: rfr:Rfer_3672 putative integral membrane protein.
 
    0.881
ACS20014.1
PFAM: FAD dependent oxidoreductase; KEGG: mpt:Mpe_A3664 glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.816
ACS22291.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csa:Csal_2612 binding-protein-dependent transport systems inner membrane component.
 
 
 0.786
ACS19968.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_3718 sugar ABC transporter, permease protein, putative.
 
 0.767
ugpE
Binding-protein-dependent transport systems inner membrane component; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 0.744
ugpE-2
Binding-protein-dependent transport systems inner membrane component; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 0.743
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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