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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20018.1PFAM: sulfatase; KEGG: aav:Aave_4610 sulfatase. (614 aa)    
Predicted Functional Partners:
ACS21618.1
Hypothetical protein; KEGG: bmj:BMULJ_02752 glucoamylase.
  
   
 0.675
ACS19142.1
KEGG: bur:Bcep18194_B0491 hypothetical protein.
  
     0.673
ACS20017.1
PFAM: protein of unknown function DUF1058; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: dia:Dtpsy_1934 SH3 type 3 domain protein.
 
     0.659
ACS16835.1
KEGG: cja:CJA_0124 hypothetical protein.
 
  
 0.648
ACS20330.1
PFAM: OmpA/MotB domain protein; KEGG: azo:azo3773 hypothetical protein.
  
     0.638
ACS19385.1
KEGG: aav:Aave_3368 hypothetical protein.
  
     0.605
ACS18892.1
KEGG: hypothetical protein.
    
 
 0.592
ACS17186.1
PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: mlo:mlr3300 hypothetical protein.
  
     0.579
ACS21916.1
Putative membrane protein involved in toxin uptake; KEGG: dac:Daci_2082 hypothetical protein.
  
     0.570
ACS16920.1
PFAM: O-antigen polymerase; KEGG: har:HEAR0457 hypothetical protein.
 
   
 0.567
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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