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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20027.1PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: reu:Reut_B5143 major facilitator transporter. (484 aa)    
Predicted Functional Partners:
ACS20026.1
KEGG: bbt:BBta_3190 hypothetical protein.
 
     0.717
ACS20893.1
PFAM: major facilitator superfamily MFS_1; KEGG: rpi:Rpic_4020 major facilitator superfamily MFS_1.
 
   
 0.676
ACS19775.1
PFAM: major facilitator superfamily MFS_1; KEGG: dac:Daci_0967 major facilitator transporter.
  
   
 0.601
ACS22056.1
PFAM: major facilitator superfamily MFS_1; KEGG: mrd:Mrad2831_5847 major facilitator transporter.
 
   
 0.508
ACS20029.1
Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: pna:Pnap_1493 regulatory protein, LacI.
 
   
 0.477
ACS20028.1
Transcriptional regulator, RpiR family; PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; regulatory protein LacI; KEGG: bxe:Bxe_C1233 RpiR family transcriptional regulator.
       0.440
ACS21749.1
PFAM: major facilitator superfamily MFS_1; KEGG: dac:Daci_2813 major facilitator transporter.
 
   
 0.430
ACS17382.1
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: aav:Aave_1646 general substrate transporter.
  
   
 0.428
ACS20034.1
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: pna:Pnap_1489 extracellular solute-binding protein.
 
    0.425
ACS20031.1
PFAM: PfkB domain protein; KEGG: pol:Bpro_1737 PfkB.
  
  
 0.424
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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