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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20035.1TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pna:Pnap_1491 polar amino acid ABC transporter, inner membrane subunit. (217 aa)    
Predicted Functional Partners:
ACS20033.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_1488 ABC transporter related.
 0.993
ACS20036.1
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pna:Pnap_1492 polar amino acid ABC transporter, inner membrane subunit.
 
  
 
0.974
ACS21725.1
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: rfr:Rfer_3807 extracellular solute-binding protein.
 
 0.974
ACS16824.1
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: pol:Bpro_1040 extracellular solute-binding protein, family 3.
 
 0.965
ACS20034.1
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: pna:Pnap_1489 extracellular solute-binding protein.
 
 0.941
ACS20287.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lch:Lcho_3208 ABC transporter-related protein.
 
 0.870
ACS22184.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr8119 ABC transporter ATP-binding protein.
 
 0.862
ACS22433.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpd:RPD_2561 ABC transporter related.
 
 0.860
ACS20284.1
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: pol:Bpro_3472 extracellular solute-binding protein, family 3; Belongs to the bacterial solute-binding protein 3 family.
 
 0.859
ACS18536.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dac:Daci_5772 ABC transporter related.
 
 0.857
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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