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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20055.1KEGG: dia:Dtpsy_0919 fkbp-type peptidyl-prolyl cis-trans isomerase. (174 aa)    
Predicted Functional Partners:
rpsB
TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; KEGG: aav:Aave_1823 SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family.
  
   0.795
rpsC
Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
   
   0.743
ureG
Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
    
 
 0.693
ACS20054.1
PFAM: Cupin 4 family protein; KEGG: aav:Aave_1332 cupin 4 family protein.
       0.649
ACS20053.1
KEGG: rfr:Rfer_2643 hypothetical protein.
       0.610
rpsJ
Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
  
    0.601
ACS20646.1
PFAM: peptidylprolyl isomerase FKBP-type; KEGG: aav:Aave_3772 peptidylprolyl isomerase, FKBP-type.
  
   
 0.527
ACS19274.1
TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: pol:Bpro_2942 isocitrate dehydrogenase.
  
    0.482
fur
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: dac:Daci_6009 ferric uptake regulator family protein; Belongs to the Fur family.
  
    0.459
ACS18950.1
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: rfr:Rfer_2898 thioredoxin; Belongs to the thioredoxin family.
  
   0.443
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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