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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20066.1KEGG: rfr:Rfer_3247 transcriptional regulatory protein NadR. (233 aa)    
Predicted Functional Partners:
ACS20065.1
TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; KEGG: mpt:Mpe_A2849 putative transporter.
 
   
 0.934
ACS16957.1
PFAM: Silent information regulator protein Sir2; KEGG: aeh:Mlg_2040 silent information regulator protein Sir2.
   
  
 0.791
ACS20067.1
KEGG: reh:H16_B1029 hypothetical protein.
       0.780
ftsB
Septum formation initiator; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.
       0.611
ACS21222.1
PFAM: protein of unknown function DUF179; KEGG: pol:Bpro_1142 protein of unknown function DUF179; Belongs to the UPF0301 (AlgH) family.
   
    0.600
ACS21678.1
KEGG: dia:Dtpsy_3146 hypothetical protein.
  
     0.597
ACS22104.1
KEGG: vei:Veis_2291 CopG/Arc/MetJ family transcriptional regulator.
  
    0.597
ACS17727.1
PFAM: General secretion pathway L; KEGG: pol:Bpro_1326 hypothetical protein.
  
     0.595
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
       0.581
ACS20062.1
PFAM: protein of unknown function DUF1330; KEGG: dac:Daci_5107 hypothetical protein.
 
     0.574
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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