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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20082.1PFAM: SNARE associated Golgi protein; KEGG: dac:Daci_5129 SNARE associated Golgi protein. (222 aa)    
Predicted Functional Partners:
mutL
DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.
       0.666
ACS19714.1
PFAM: protein of unknown function DUF980; KEGG: pol:Bpro_2870 protein of unknown function DUF980; Belongs to the MtfA family.
  
  
 0.533
ACS20629.1
PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA1808 transporter.
 
     0.477
ACS20609.1
SMART: Rhodanese domain protein; KEGG: mpt:Mpe_A3647 hypothetical protein.
 
     0.446
mntH
Mn2+/Fe2+ transporter, NRAMP family; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
 
   
 0.443
ACS21280.1
PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_4048 major facilitator superfamily transporter.
 
   
 0.435
ACS22217.1
TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: pfl:PFL_2315 EmrB/QacA family drug resistance transporter.
 
   
 0.431
ACS20094.1
PFAM: protein of unknown function DUF214; KEGG: pna:Pnap_1153 hypothetical protein.
  
  
 0.429
ACS21595.1
PFAM: major facilitator superfamily MFS_1; KEGG: bcj:BCAM1616 major facilitator superfamily protein.
 
     0.418
ACS22763.1
PFAM: major facilitator superfamily MFS_1; KEGG: scl:sce1119 hypothetical protein.
 
   
 0.401
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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