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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20134.1KEGG: rfr:Rfer_1487 putative transporter signal peptide protein. (426 aa)    
Predicted Functional Partners:
ACS19548.1
PFAM: inner-membrane translocator; KEGG: dia:Dtpsy_2023 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.846
ACS19549.1
PFAM: inner-membrane translocator; KEGG: dia:Dtpsy_2024 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.823
ACS19547.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_2575 ABC transporter related.
 
  
 0.804
ACS20133.1
PFAM: aminotransferase class I and II; aminotransferase class V; KEGG: pol:Bpro_3262 aspartate aminotransferase.
       0.769
ACS19048.1
PFAM: inner-membrane translocator; KEGG: dac:Daci_2555 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.663
ACS19546.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_2574 ABC transporter related.
 
  
 0.660
ACS16846.1
PFAM: inner-membrane translocator; KEGG: pol:Bpro_4063 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.628
ACS21369.1
PFAM: GCN5-related N-acetyltransferase; KEGG: pol:Bpro_4211 GCN5-related N-acetyltransferase.
  
     0.623
ACS17879.1
PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase; KEGG: dac:Daci_0574 ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.613
ACS18157.1
PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase; KEGG: vei:Veis_2874 ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.613
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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