STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20140.1TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_2376 nitrate ABC transporter, inner membrane subunit. (309 aa)    
Predicted Functional Partners:
ACS20141.1
KEGG: pna:Pnap_1412 nitrate ABC transporter, ATPase subunits C and D; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.997
ACS20139.1
KEGG: pol:Bpro_3267 twin-arginine translocation pathway signal.
 
 
 0.996
ACS20147.1
PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; molydopterin dinucleotide-binding region; KEGG: pol:Bpro_3279 assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.946
ACS18557.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A2157 sulfate ester ABC transporter ATPase.
  
 0.838
ACS22110.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpa:BPP1387 ATP-binding component of ABC transporter.
  
 0.832
ACS20459.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_4285 ABC transporter related.
  
 0.821
ACS16819.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_1045 ABC transporter related.
  
 0.818
ACS18510.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_0618 ABC transporter related.
 
  
 0.796
ACS16767.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_0384 ABC transporter related.
 
  
 0.794
ACS18549.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: scl:sce4768 ABC-type transporter, ATP-binding protein.
  
 0.775
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.