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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20156.1PFAM: HI0933 family protein; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: dia:Dtpsy_2335 HI0933 family protein. (402 aa)    
Predicted Functional Partners:
ACS20154.1
PFAM: fatty acid hydroxylase; KEGG: aav:Aave_2098 sterol desaturase.
       0.694
ACS20155.1
KEGG: ypg:YpAngola_A3877 hypothetical protein.
       0.680
rpsU
TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; KEGG: dia:Dtpsy_2347 ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
       0.544
ACS20153.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_1008 binding-protein-dependent transport systems inner membrane component.
       0.453
ACS21081.1
PFAM: surface antigen (D15); KEGG: aav:Aave_3955 surface antigen (D15).
  
    0.427
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate; Belongs to the cytidylate kinase family. Type 1 subfamily.
  
    0.426
ACS20158.1
KEGG: aav:Aave_2091 GatB/YqeY domain-containing protein.
       0.423
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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