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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20165.1PFAM: globin; KEGG: lch:Lcho_0052 globin. (119 aa)    
Predicted Functional Partners:
ACS20164.1
Cupin region; KEGG: pol:Bpro_0272 cupin region.
  
    0.615
ACS20166.1
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: sus:Acid_5780 serine/threonine protein kinase.
       0.509
ACS22886.1
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; globin; KEGG: pap:PSPA7_2535 nitric oxide dioxygenase; Belongs to the globin family.
  
  
 0.507
ACS18744.1
PFAM: DSBA oxidoreductase; KEGG: bcm:Bcenmc03_4435 DsbA oxidoreductase.
  
  
 0.479
ACS19936.1
PFAM: DSBA oxidoreductase; KEGG: rfr:Rfer_0115 DsbA oxidoreductase.
  
  
 0.479
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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