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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20199.1PFAM: Di-haem cytochrome c peroxidase; KEGG: bxe:Bxe_B0346 putative cytochrome c peroxidase. (476 aa)    
Predicted Functional Partners:
ACS20198.1
KEGG: bxe:Bxe_B0345 hypothetical protein.
 
     0.845
ACS20200.1
KEGG: bxe:Bxe_B0347 hypothetical protein.
       0.723
ACS20201.1
KEGG: bxe:Bxe_B0348 procollagen-proline,2-oxoglutarate-4-dioxygenase; PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit.
       0.723
ACS16992.1
PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: rpa:RPA4432 NHL repeat-containing protein.
  
 
 0.714
tolB
Tol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.669
ACS18278.1
TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: pol:Bpro_1802 hypothetical protein.
 
 
 0.667
ACS17031.1
PFAM: Ricin B lectin; PKD domain containing protein; SMART: Ricin B lectin; PKD domain containing protein; KEGG: scl:sce8906 hypothetical protein.
  
 
 0.622
ACS19657.1
TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: lch:Lcho_3851 YVTN beta-propeller repeat-containing protein.
  
 
 0.622
ACS19664.1
TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: NHL repeat containing protein; KEGG: mpt:Mpe_A3013 hypothetical protein.
  
 
 0.622
ACS20263.1
KEGG: met:M446_5908 hypothetical protein.
  
 
 0.622
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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