close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20200.1KEGG: bxe:Bxe_B0347 hypothetical protein. (202 aa)    
Predicted Functional Partners:
ACS20201.1
KEGG: bxe:Bxe_B0348 procollagen-proline,2-oxoglutarate-4-dioxygenase; PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit.
       0.773
ACS20198.1
KEGG: bxe:Bxe_B0345 hypothetical protein.
       0.723
ACS20199.1
PFAM: Di-haem cytochrome c peroxidase; KEGG: bxe:Bxe_B0346 putative cytochrome c peroxidase.
       0.723
ACS20202.1
PFAM: transcriptional regulator PadR family protein; KEGG: mms:mma_1845 transcriptional regulator.
       0.527
ACS20203.1
PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: mms:mma_1846 iron utilization protein.
       0.493
ACS20197.1
Putative signal transduction protein; PFAM: Metal-dependent hydrolase HDOD; KEGG: rfr:Rfer_2482 putative signal transduction protein.
       0.416
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.