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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20202.1PFAM: transcriptional regulator PadR family protein; KEGG: mms:mma_1845 transcriptional regulator. (203 aa)    
Predicted Functional Partners:
ACS20203.1
PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: mms:mma_1846 iron utilization protein.
   
 0.907
ACS20201.1
KEGG: bxe:Bxe_B0348 procollagen-proline,2-oxoglutarate-4-dioxygenase; PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit.
       0.542
ACS20200.1
KEGG: bxe:Bxe_B0347 hypothetical protein.
       0.527
ACS20198.1
KEGG: bxe:Bxe_B0345 hypothetical protein.
       0.496
ACS20199.1
PFAM: Di-haem cytochrome c peroxidase; KEGG: bxe:Bxe_B0346 putative cytochrome c peroxidase.
       0.496
ACS16957.1
PFAM: Silent information regulator protein Sir2; KEGG: aeh:Mlg_2040 silent information regulator protein Sir2.
  
    0.431
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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