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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20208.1KEGG: pna:Pnap_1357 hypothetical protein. (269 aa)    
Predicted Functional Partners:
ACS20207.1
PFAM: 20S proteasome A and B subunits; KEGG: pna:Pnap_1358 20S proteasome, A and B subunits.
       0.819
mutS
DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.
   
   0.789
ACS20209.1
Two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver; KEGG: reh:H16_B0621 response regulator, NarL-family.
       0.737
ACS21711.1
PFAM: branched-chain amino acid transport; KEGG: pol:Bpro_4636 branched-chain amino acid transport.
  
     0.684
ACS17012.1
PFAM: regulatory protein TetR; KEGG: rfr:Rfer_3529 TetR family transcriptional regulator.
  
     0.638
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.594
ACS21369.1
PFAM: GCN5-related N-acetyltransferase; KEGG: pol:Bpro_4211 GCN5-related N-acetyltransferase.
  
    0.587
ACS21390.1
KEGG: dia:Dtpsy_0437 hypothetical protein.
  
     0.562
ACS21403.1
PFAM: regulatory protein TetR; KEGG: pna:Pnap_3496 TetR family transcriptional regulator.
  
     0.525
ACS18122.1
KEGG: rfr:Rfer_1400 hypothetical protein.
 
     0.510
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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