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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20370.1KEGG: dac:Daci_2123 putative lipoprotein. (194 aa)    
Predicted Functional Partners:
ACS18421.1
PFAM: CsbD family protein; KEGG: efe:EFER_4136 putative stress response protein; Belongs to the UPF0337 (CsbD) family.
  
    0.872
ACS20723.1
PFAM: protein of unknown function DUF1328; KEGG: mpt:Mpe_A2904 hypothetical protein.
   
    0.738
ACS16706.1
PFAM: protein of unknown function DUF1328; KEGG: pol:Bpro_0066 protein of unknown function DUF1328.
   
    0.591
ACS19470.1
PFAM: protein of unknown function DUF1458; KEGG: pna:Pnap_0234 hypothetical protein.
   
    0.584
ACS19807.1
PFAM: polysaccharide export protein; KEGG: pna:Pnap_3196 polysaccharide export protein.
  
    0.557
ACS18572.1
PFAM: polysaccharide export protein; KEGG: bac:BamMC406_1118 polysaccharide export protein.
  
    0.552
ACS17417.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: smt:Smal_0491 ABC transporter related.
   
    0.548
glmS
Glucosamine/fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
   
    0.548
ACS19241.1
KEGG: cbs:COXBURSA331_A1986 hypothetical protein.
   
    0.548
ACS17840.1
PFAM: polysaccharide export protein; KEGG: bam:Bamb_6483 polysaccharide export protein.
  
    0.545
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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