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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20383.1KEGG: pol:Bpro_1598 hypothetical protein. (279 aa)    
Predicted Functional Partners:
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
       0.788
ACS18340.1
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mca:MCA0083 UbiE/COQ5 family methlytransferase.
  
     0.641
ACS17172.1
ABC-type uncharacterized transport system periplasmic component-like protein; KEGG: azo:azo1878 hypothetical protein.
  
     0.608
ACS21383.1
KEGG: sbn:Sbal195_2514 hypothetical protein.
  
     0.603
ACS21072.1
KEGG: dac:Daci_2082 hypothetical protein.
  
     0.585
ACS20247.1
KEGG: xac:XAC4267 hypothetical protein.
  
     0.575
ACS16920.1
PFAM: O-antigen polymerase; KEGG: har:HEAR0457 hypothetical protein.
  
     0.574
ACS20385.1
PFAM: protein of unknown function DUF520; KEGG: aav:Aave_1854 nucleotide-binding protein; Belongs to the UPF0234 family.
       0.568
ACS20386.1
KEGG: pna:Pnap_1079 hypothetical protein.
       0.567
ACS21916.1
Putative membrane protein involved in toxin uptake; KEGG: dac:Daci_2082 hypothetical protein.
  
     0.560
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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