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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20386.1KEGG: pna:Pnap_1079 hypothetical protein. (213 aa)    
Predicted Functional Partners:
ACS20385.1
PFAM: protein of unknown function DUF520; KEGG: aav:Aave_1854 nucleotide-binding protein; Belongs to the UPF0234 family.
       0.861
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
     
 0.649
ACS21229.1
PFAM: CheW domain protein; KEGG: pol:Bpro_1138 CheW-like protein.
  
     0.642
ACS20951.1
KEGG: pol:Bpro_1298 hypothetical protein.
  
     0.631
ACS17794.1
PFAM: Pilus assembly protein PilP; KEGG: rfr:Rfer_2922 pilus assembly protein, PilQ.
  
     0.580
ACS17558.1
KEGG: pol:Bpro_1065 hypothetical protein.
  
     0.567
ACS20383.1
KEGG: pol:Bpro_1598 hypothetical protein.
       0.567
ACS18792.1
PFAM: glutaredoxin; KEGG: aav:Aave_2457 glutaredoxin.
 
     0.557
ACS18052.1
KEGG: pol:Bpro_3636 putative transmembrane protein.
 
     0.533
ACS21719.1
KEGG: pol:Bpro_4643 protein of unknown function DUF1631.
 
     0.525
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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