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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20400.1Hypothetical protein. (118 aa)    
Predicted Functional Partners:
ACS18774.1
PFAM: aminotransferase class I and II; KEGG: pna:Pnap_1562 aromatic amino acid aminotransferase.
     
 0.923
ACS18592.1
PFAM: ribulose bisphosphate carboxylase large chain; KEGG: pol:Bpro_0032 ribulose 1,5-bisphosphate carboxylase large subunit; Belongs to the RuBisCO large chain family.
  
  
 0.890
cbbL
Ribulose-bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily.
  
  
 0.890
ACS20401.1
PFAM: NLPA lipoprotein; KEGG: dac:Daci_4596 NlpA lipoprotein; Belongs to the nlpA lipoprotein family.
  
  
 0.728
ACS20402.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_4597 binding-protein-dependent transport systems inner membrane component.
  
  
 0.665
ACS20403.1
ABC transporter related; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
  
  
 0.657
ACS21745.1
PFAM: class II aldolase/adducin family protein; KEGG: rfr:Rfer_0444 putative aldolase.
  
  
 0.629
ACS16830.1
PFAM: homocysteine S-methyltransferase; KEGG: pna:Pnap_0115 homocysteine S-methyltransferase.
  
  
 0.623
ACS21286.1
KEGG: aav:Aave_4058 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
   
  
 0.577
ACS16898.1
PFAM: class II aldolase/adducin family protein; KEGG: bxe:Bxe_B1223 hypothetical protein.
  
  
 0.508
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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