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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20436.1PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: vei:Veis_4477 transposase IS116/IS110/IS902 family protein. (316 aa)    
Predicted Functional Partners:
ACS19036.1
PFAM: Integrase catalytic region; KEGG: bxe:Bxe_A0541 putative transposase integrase.
 
  
 0.484
ACS20461.1
PFAM: Integrase catalytic region; KEGG: bxe:Bxe_A0541 putative transposase integrase.
 
  
 0.482
ACS20275.1
PFAM: Integrase catalytic region; KEGG: bxe:Bxe_A0541 putative transposase integrase.
 
  
 0.476
ACS20437.1
PFAM: conserved hypothetical protein; KEGG: vei:Veis_0889 hypothetical protein.
       0.470
ACS17379.1
PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: eba:ebA6749 transposase.
 
     0.459
ACS22903.1
PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: eba:ebA6749 transposase.
 
     0.458
ACS22904.1
PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: eba:ebA6749 transposase.
 
     0.458
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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