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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20446.1PFAM: AMP-dependent synthetase and ligase; KEGG: vei:Veis_4281 AMP-dependent synthetase and ligase. (509 aa)    
Predicted Functional Partners:
ACS20445.1
KEGG: vei:Veis_4280 succinate-semialdehyde dehydrogenase (NAD(P)(+)).
 
 0.869
ACS21681.1
PFAM: phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; SMART: phospholipid/glycerol acyltransferase; KEGG: dia:Dtpsy_3151 phospholipid/glycerol acyltransferase.
  
 
 0.859
ACS17923.1
KEGG: bja:bll0558 hypothetical protein.
     
 0.800
ACS20447.1
PFAM: protein of unknown function DUF81; KEGG: sit:TM1040_0154 hypothetical protein.
       0.774
ACS22347.1
PFAM: manganese and iron superoxide dismutase; SMART: Rhodanese domain protein; KEGG: pol:Bpro_2502 manganese and iron superoxide dismutase.
  
 
 0.753
ACS20443.1
PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: mpt:Mpe_A3670 IclR family transcriptional regulator.
   
   0.742
ACS20444.1
PFAM: conserved hypothetical protein; KEGG: vei:Veis_4279 hypothetical protein.
       0.740
ACS19802.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Beta-ketoacyl synthase; aminotransferase class-III; Acyl transferase; phosphopantetheine-binding; KEGG: bph:Bphy_1672 amino acid adenylation domain-containing protein.
  
0.716
ACS21488.1
PFAM: AMP-dependent synthetase and ligase; KEGG: dac:Daci_1405 AMP-dependent synthetase and ligase.
  
  
 
0.706
ACS21398.1
PFAM: AMP-dependent synthetase and ligase; KEGG: rfr:Rfer_3898 AMP-dependent synthetase and ligase.
  
  
 
0.704
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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