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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20447.1PFAM: protein of unknown function DUF81; KEGG: sit:TM1040_0154 hypothetical protein. (267 aa)    
Predicted Functional Partners:
ACS20445.1
KEGG: vei:Veis_4280 succinate-semialdehyde dehydrogenase (NAD(P)(+)).
 
     0.821
ACS20446.1
PFAM: AMP-dependent synthetase and ligase; KEGG: vei:Veis_4281 AMP-dependent synthetase and ligase.
       0.774
ACS20443.1
PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: mpt:Mpe_A3670 IclR family transcriptional regulator.
       0.718
ACS20444.1
PFAM: conserved hypothetical protein; KEGG: vei:Veis_4279 hypothetical protein.
       0.718
ACS20462.1
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: vei:Veis_4287 GntR family transcriptional regulator.
  
   
 0.670
ACS20429.1
PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: vei:Veis_3996 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
   
 0.625
ACS20448.1
KEGG: xom:XOO_3046 hypothetical protein.
       0.613
ACS20427.1
PFAM: DMSO reductase anchor subunit (DmsC); KEGG: vei:Veis_3994 DMSO reductase anchor subunit (DmsC).
  
     0.549
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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