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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20462.1Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: vei:Veis_4287 GntR family transcriptional regulator. (506 aa)    
Predicted Functional Partners:
ACS20463.1
PFAM: protein of unknown function DUF1486; KEGG: pna:Pnap_4728 hypothetical protein.
 
     0.687
ACS17226.1
Transcriptional regulator, GntR family with aminotransferase domain; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: pna:Pnap_2106 GntR family transcriptional regulator.
  
    0.670
ACS20447.1
PFAM: protein of unknown function DUF81; KEGG: sit:TM1040_0154 hypothetical protein.
  
   
 0.670
ACS20464.1
PFAM: FAD dependent oxidoreductase; KEGG: vei:Veis_4289 FAD dependent oxidoreductase.
 
   
 0.626
ACS20460.1
KEGG: vei:Veis_4286 taurine ABC transporter, periplasmic binding protein; TIGRFAM: taurine ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3.
 
   
 0.483
ACS20461.1
PFAM: Integrase catalytic region; KEGG: bxe:Bxe_A0541 putative transposase integrase.
       0.481
ACS20427.1
PFAM: DMSO reductase anchor subunit (DmsC); KEGG: vei:Veis_3994 DMSO reductase anchor subunit (DmsC).
 
   
 0.466
ACS20429.1
PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: vei:Veis_3996 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
    0.434
ACS20439.1
TIGRFAM: sulfoacetaldehyde acetyltransferase; PFAM: thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: vei:Veis_3999 sulfoacetaldehyde acetyltransferase; Belongs to the TPP enzyme family.
 
    0.425
ACS20459.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_4285 ABC transporter related.
 
     0.420
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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