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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20463.1PFAM: protein of unknown function DUF1486; KEGG: pna:Pnap_4728 hypothetical protein. (140 aa)    
Predicted Functional Partners:
ACS20464.1
PFAM: FAD dependent oxidoreductase; KEGG: vei:Veis_4289 FAD dependent oxidoreductase.
 
     0.922
ACS20442.1
Cobaltochelatase; PFAM: Cobalt chelatase CobT subunit; KEGG: bxe:Bxe_B0688 putative cobalamin biosynthesis CobT protein.
 
     0.745
ACS20462.1
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: vei:Veis_4287 GntR family transcriptional regulator.
 
     0.687
ACS20439.1
TIGRFAM: sulfoacetaldehyde acetyltransferase; PFAM: thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: vei:Veis_3999 sulfoacetaldehyde acetyltransferase; Belongs to the TPP enzyme family.
  
    0.684
ACS20465.1
PFAM: GCN5-related N-acetyltransferase; KEGG: bja:blr7421 acetyltransferase.
 
     0.551
ACS20441.1
Cobaltochelatase; PFAM: ATPase associated with various cellular activities AAA_5; KEGG: bpy:Bphyt_4365 cobaltochelatase.
  
     0.546
ACS20460.1
KEGG: vei:Veis_4286 taurine ABC transporter, periplasmic binding protein; TIGRFAM: taurine ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3.
 
     0.522
ACS22358.1
KEGG: bxe:Bxe_B2726 hypothetical protein.
  
     0.426
ACS16918.1
KEGG: aav:Aave_0265 hypothetical protein.
  
    0.406
ACS18875.1
KEGG: hch:HCH_01177 hypothetical protein.
 
     0.406
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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