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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20477.1PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: bxe:Bxe_B2593 putative lipoprotein. (439 aa)    
Predicted Functional Partners:
ACS20474.1
SMART: phospholipase D/Transphosphatidylase; KEGG: bac:BamMC406_6428 phospholipase D/transphosphatidylase.
 
   
 0.621
ACS16813.1
PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pna:Pnap_0112 ATPase central domain-containing protein.
   
 0.584
ACS19649.1
CbbX protein; KEGG: mpt:Mpe_A2784 AAA type ATPase; TIGRFAM: CbbX protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase.
   
 0.584
ACS20478.1
KEGG: rso:RS01955 hypothetical protein.
       0.559
ACS20476.1
PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: bac:BamMC406_6427 Sel1 domain-containing protein.
 
    
0.505
ACS17105.1
PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: rfr:Rfer_1266 Sel1-like.
  
     0.439
ACS21558.1
KEGG: pol:Bpro_4074 putative chromosome segregation ATPases.
  
    0.401
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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