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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20482.1PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_5618 binding-protein-dependent transport systems inner membrane component. (360 aa)    
Predicted Functional Partners:
ACS20481.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpi:Rpic_4457 ABC transporter related.
 
  
 0.968
ACS20483.1
PFAM: NMT1/THI5 like domain protein; KEGG: rpi:Rpic_4459 NMT1/THI5 like domain protein.
 
  
 0.966
ACS20479.1
TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: reh:H16_B0887 ABC-type transporter, periplasmic component: TauT family.
 
  
 0.933
ACS20480.1
PFAM: cytochrome c class I; KEGG: dac:Daci_5620 cytochrome c, mono-and diheme variant-like protein.
 
     0.856
ACS18557.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A2157 sulfate ester ABC transporter ATPase.
 
  
 0.820
ACS20486.1
SMART: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_C7086 ABC nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein.
 
  
 0.820
ACS16819.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_1045 ABC transporter related.
 
  
 0.801
ACS19594.1
KEGG: mms:mma_2619 sulfonate/nitrate transport system substrate-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3.
 
  
 0.773
ACS20488.1
KEGG: bph:Bphy_5227 substrate-binding region of ABC-type glycine betaine transport system.
 
  
 0.773
ACS18510.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_0618 ABC transporter related.
 
  
 0.770
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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