close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20485.1PFAM: Luciferase-like monooxygenase; KEGG: reu:Reut_B5047 alkanesulfonate monooxygenase. (369 aa)    
Predicted Functional Partners:
ACS19600.1
PFAM: NADPH-dependent FMN reductase; KEGG: pna:Pnap_2421 NADPH-dependent FMN reductase.
 
 0.984
ACS20486.1
SMART: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_C7086 ABC nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein.
 
 
 0.972
ACS18551.1
PFAM: NADPH-dependent FMN reductase; KEGG: aav:Aave_0879 NADPH-dependent FMN reductase.
 
 0.971
ACS20488.1
KEGG: bph:Bphy_5227 substrate-binding region of ABC-type glycine betaine transport system.
 
 
 0.960
ACS20479.1
TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: reh:H16_B0887 ABC-type transporter, periplasmic component: TauT family.
 
 
 0.954
ACS17629.1
PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: bcj:BCAS0426 putative taurine dioxygenase.
 
 
 0.935
ACS22550.1
PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: pla:Plav_0829 taurine dioxygenase.
 
 
 0.935
ACS19594.1
KEGG: mms:mma_2619 sulfonate/nitrate transport system substrate-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3.
 
 
 0.924
ACS19598.1
TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: rfr:Rfer_1779 ABC transporter, substrate-binding protein, aliphatic sulphonates.
 
 
 0.924
ssuD
Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
 
  
 
0.921
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.