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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS20486.1SMART: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_C7086 ABC nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein. (329 aa)    
Predicted Functional Partners:
ACS20485.1
PFAM: Luciferase-like monooxygenase; KEGG: reu:Reut_B5047 alkanesulfonate monooxygenase.
 
 
 0.972
ssuD
Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
 
 
 0.932
ACS19600.1
PFAM: NADPH-dependent FMN reductase; KEGG: pna:Pnap_2421 NADPH-dependent FMN reductase.
 
 
  0.919
ACS19595.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pna:Pnap_2417 binding-protein-dependent transport systems inner membrane component.
 
  
 0.854
ACS18551.1
PFAM: NADPH-dependent FMN reductase; KEGG: aav:Aave_0879 NADPH-dependent FMN reductase.
 
 
  0.849
ssuB
ABC transporter related; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
  
 0.831
ACS20482.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_5618 binding-protein-dependent transport systems inner membrane component.
 
  
 0.820
ACS20487.1
PFAM: Acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain protein; KEGG: cti:RALTA_B1563 putative acyl-CoA dehydrogenase.
 
    0.807
ACS18546.1
KEGG: pna:Pnap_2420 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein.
  
     0.768
ACS18558.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A2158 sulfate ester ABC transporter inner membrane protein.
 
  
 0.694
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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